STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002156annotation not available (195 aa)    
Predicted Functional Partners:
MICU1
Mitochondrial calcium uptake 1.
    
 0.997
MICU2
Mitochondrial calcium uptake 2.
    
 0.996
MCU
Mitochondrial calcium uniporter.
    
 0.993
MICU3
Mitochondrial calcium uptake family member 3.
    
 0.991
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
   0.957
SLC25A12
Solute carrier family 25 member 12.
     
 0.904
MCUR1
Mitochondrial calcium uniporter regulator 1.
    
 
 0.770
SLC25A13
Solute carrier family 25 member 13.
     
 0.745
FAF2
Fas associated factor family member 2.
    
   0.700
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.687
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.