STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TREX2Three prime repair exonuclease 2. (267 aa)    
Predicted Functional Partners:
RPN1
Ribophorin I.
    
  0.900
ENSCAPP00000012499
annotation not available
    
 0.893
PCNA
Proliferating cell nuclear antigen.
  
 0.872
FBH1
F-box DNA helicase 1.
  
 
 0.710
REXO2
RNA exonuclease 2.
  
 0.702
EXOSC10
Exosome component 10.
  
 0.690
GMPS
Guanine monophosphate synthase.
    
 0.669
YARS1
tyrosyl-tRNA synthetase 1.
  
  
 0.661
HELZ2
Helicase with zinc finger 2.
  
 0.660
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
 
 0.655
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.