STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002159annotation not available (215 aa)    
Predicted Functional Partners:
EIF4A3
Eukaryotic translation initiation factor 4A3.
    
 0.988
XAB2
XPA binding protein 2.
   
 0.987
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.986
BUD31
BUD31 homolog.
   
 0.982
BUD13
BUD13 homolog.
   
 0.981
AQR
Aquarius intron-binding spliceosomal factor.
   
 0.981
CDC5L
Cell division cycle 5 like.
   
 0.981
CWC27
CWC27 spliceosome associated cyclophilin.
   
 0.980
ENSCAPP00000012207
annotation not available
   
 0.980
SF3B1
Splicing factor 3b subunit 1.
   
 0.978
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.