Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THY1Thy-1 cell surface antigen. (161 aa)    
Predicted Functional Partners:
ITGAM
Integrin subunit alpha M.
    
 0.960
ITGB1
Integrin subunit beta 1.
     
 0.936
ENSCAPP00000013226
annotation not available
    
 0.931
ITGAD
Integrin subunit alpha D.
    
 0.912
ENSCAPP00000003816
annotation not available
     
 0.911
ENSCAPP00000006326
annotation not available
     
 0.890
ITGB2
Integrin subunit beta 2.
     
 0.890
PSEN1
Presenilin 1.
      
 0.856
ITGB7
Integrin subunit beta 7.
   
 
 0.831
PIGK
Phosphatidylinositol glycan anchor biosynthesis class K.
    
 
 0.829
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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