STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H8Zinc finger CCCH-type containing 8. (240 aa)    
Predicted Functional Partners:
ICE2
Interactor of little elongation complex ELL subunit 2.
     
 0.950
ELL
Elongation factor for RNA polymerase II.
     
 0.945
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.935
AFF4
AF4/FMR2 family member 4.
    
 0.935
NELFE
Negative elongation factor complex member E.
    
 0.935
CDC73
Cell division cycle 73.
   
 0.934
AFF1
AF4/FMR2 family member 1.
    
 0.931
EAF1
ELL associated factor 1.
    
  0.930
EAF2
ELL associated factor 2.
    
  0.930
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
  0.929
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.