STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002171annotation not available (83 aa)    
Predicted Functional Partners:
RPL8
Ribosomal protein L8.
  
 0.994
ENSCAPP00000004779
annotation not available
  
 0.994
RPL19
Ribosomal protein L19.
  
 0.993
RPL29
Ribosomal protein L29.
   
 0.993
RPL32
Ribosomal protein L32.
  
 0.993
RPL30
Ribosomal protein L30.
   
 0.993
RPL5
Ribosomal protein L5.
  
 0.993
RPL31
Ribosomal protein L31.
   
 0.993
ENSCAPP00000014714
annotation not available
   
 0.993
RPL23
Ribosomal protein L23.
  
 0.993
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.