Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNPO1Transportin 1. (794 aa)    
Predicted Functional Partners:
TNPO2
Transportin 2.
   
  0.999
ENSCAPP00000014824
annotation not available
   
 0.996
IPO9
Importin 9.
   
 0.995
KPNB1
Karyopherin subunit beta 1.
   
 0.994
IPO4
Importin 4.
   
 0.989
TNPO3
Transportin 3.
   
 0.984
FUS
FUS RNA binding protein.
    
 
 0.975
IPO7
Importin 7.
   
 0.974
ENSCAPP00000010024
annotation not available
   
 0.974
IPO8
Importin 8.
   
 0.974
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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