STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD3Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (701 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
  
0.900
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
  0.887
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
  
 
 
0.865
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
  0.861
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
   
 0.851
COLGALT1
Collagen beta(1-O)galactosyltransferase 1.
   
0.851
SUV39H2
Suppressor of variegation 3-9 homolog 2.
    
  0.837
SMYD3
SET and MYND domain containing 3.
   
 0.828
NSD2
Nuclear receptor binding SET domain protein 2.
    
 0.828
NSD3
Nuclear receptor binding SET domain protein 3.
    
 0.828
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.