Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002177annotation not available (316 aa)    
Predicted Functional Partners:
RPS9
Ribosomal protein S9.
      
 0.921
LENG8
Leukocyte receptor cluster member 8.
      
 0.759
ENSCAPP00000006804
annotation not available
     
  0.749
EVC2
EvC ciliary complex subunit 2.
     
  0.749
EVC
EvC ciliary complex subunit 1.
     
  0.749
LRRC8C
Leucine rich repeat containing 8 VRAC subunit C.
      
 0.746
UNK
Unk zinc finger.
      
 0.659
ALCAM
Activated leukocyte cell adhesion molecule.
      
 0.657
ENSCAPP00000018242
annotation not available
      
 0.571
ENSCAPP00000005843
annotation not available
      
 0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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