STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002179annotation not available (138 aa)    
Predicted Functional Partners:
SDC1
Syndecan 1.
    
 0.751
NOTUM
Notum, palmitoleoyl-protein carboxylesterase.
    
 0.719
IHH
Indian hedgehog signaling molecule.
    
 0.690
GPC3
Glypican 3.
    
 0.646
HBEGF
Heparin binding EGF like growth factor.
    
 0.637
ENSCAPP00000016174
annotation not available
    
 0.619
GPC5
Glypican 5.
    
0.608
FZD6
Frizzled class receptor 6.
     
 0.586
FZD9
Frizzled class receptor 9.
     
 0.586
ENSCAPP00000011186
annotation not available
     
 0.586
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.