Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPEM2SPEM family member 2. (483 aa)    
Predicted Functional Partners:
SDC1
Syndecan 1.
  
 
 0.641
TNP1
Transition protein 1.
      
 0.606
SPATA16
Spermatogenesis associated 16.
      
 0.568
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.568
MST1R
Macrophage stimulating 1 receptor.
    
 0.568
TEX35
Testis expressed 35.
  
   
 0.563
ENSCAPP00000002709
annotation not available
      
 0.559
ENSCAPP00000003616
annotation not available
      
 0.544
CSF1R
Colony stimulating factor 1 receptor.
    
  0.538
KIT
KIT proto-oncogene, receptor tyrosine kinase.
    
  0.538
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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