Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANK2Ankyrin 2. (3803 aa)    
Predicted Functional Partners:
ENSCAPP00000009388
annotation not available
     
 0.939
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.939
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.926
TIAM1
TIAM Rac1 associated GEF 1.
    
 0.922
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.920
NFASC
Neurofascin.
   
 0.916
CTNNB1
Catenin beta 1.
   
 0.915
NDEL1
nudE neurodevelopment protein 1 like 1.
    
  0.912
ANK1
Ankyrin 1.
     
  0.911
ENSCAPP00000004620
annotation not available
   
 
  0.879
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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