ENSCAPP00000002193 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSCAPP00000002193

annotation not available (89 aa)

Predicted Functional Partners:

GART

0.898

ADSL

0.875

ENSCAPP00000012851

0.861

PRSS53

0.747

PIP4K2C

0.625

GPM6A

0.582

SPATA3

0.571

HEATR5A

0.569

POP4

0.540

LRRC34

0.534

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADSL	ENSCAPP00000002193	ENSCAPP00000016522	ENSCAPP00000002193	Adenylosuccinate lyase.	annotation not available	0.875
ADSL	GART	ENSCAPP00000016522	ENSCAPP00000003834	Adenylosuccinate lyase.	annotation not available	0.999
ENSCAPP00000002193	ADSL	ENSCAPP00000002193	ENSCAPP00000016522	annotation not available	Adenylosuccinate lyase.	0.875
ENSCAPP00000002193	ENSCAPP00000012851	ENSCAPP00000002193	ENSCAPP00000012851	annotation not available	annotation not available	0.861
ENSCAPP00000002193	GART	ENSCAPP00000002193	ENSCAPP00000003834	annotation not available	annotation not available	0.898
ENSCAPP00000002193	GPM6A	ENSCAPP00000002193	ENSCAPP00000016967	annotation not available	Glycoprotein M6A.	0.582
ENSCAPP00000002193	HEATR5A	ENSCAPP00000002193	ENSCAPP00000005866	annotation not available	HEAT repeat containing 5A.	0.569
ENSCAPP00000002193	LRRC34	ENSCAPP00000002193	ENSCAPP00000015885	annotation not available	Leucine rich repeat containing 34.	0.534
ENSCAPP00000002193	PIP4K2C	ENSCAPP00000002193	ENSCAPP00000015538	annotation not available	Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.	0.625
ENSCAPP00000002193	POP4	ENSCAPP00000002193	ENSCAPP00000009682	annotation not available	POP4 homolog, ribonuclease P/MRP subunit.	0.540
ENSCAPP00000002193	PRSS53	ENSCAPP00000002193	ENSCAPP00000018115	annotation not available	Serine protease 53.	0.747
ENSCAPP00000002193	SPATA3	ENSCAPP00000002193	ENSCAPP00000005982	annotation not available	Spermatogenesis associated 3.	0.571
ENSCAPP00000012851	ENSCAPP00000002193	ENSCAPP00000012851	ENSCAPP00000002193	annotation not available	annotation not available	0.861
GART	ADSL	ENSCAPP00000003834	ENSCAPP00000016522	annotation not available	Adenylosuccinate lyase.	0.999
GART	ENSCAPP00000002193	ENSCAPP00000003834	ENSCAPP00000002193	annotation not available	annotation not available	0.898
GPM6A	ENSCAPP00000002193	ENSCAPP00000016967	ENSCAPP00000002193	Glycoprotein M6A.	annotation not available	0.582
HEATR5A	ENSCAPP00000002193	ENSCAPP00000005866	ENSCAPP00000002193	HEAT repeat containing 5A.	annotation not available	0.569
LRRC34	ENSCAPP00000002193	ENSCAPP00000015885	ENSCAPP00000002193	Leucine rich repeat containing 34.	annotation not available	0.534
PIP4K2C	ENSCAPP00000002193	ENSCAPP00000015538	ENSCAPP00000002193	Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.	annotation not available	0.625
POP4	ENSCAPP00000002193	ENSCAPP00000009682	ENSCAPP00000002193	POP4 homolog, ribonuclease P/MRP subunit.	annotation not available	0.540