Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002194annotation not available (327 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
   
 0.701
ENSCAPP00000018565
annotation not available
    
 0.647
ENSCAPP00000016027
annotation not available
      
 0.644
RIPK4
Receptor interacting serine/threonine kinase 4.
    
 0.623
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.619
PEAR1
Platelet endothelial aggregation receptor 1.
      
 0.576
CCDC65
Coiled-coil domain containing 65.
   
 
 0.556
CFAP44
Cilia and flagella associated protein 44.
    
 
 0.555
DRC1
Dynein regulatory complex subunit 1.
   
   0.553
CFAP43
Cilia and flagella associated protein 43.
   
   0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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