STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002198annotation not available (341 aa)    
Predicted Functional Partners:
WDR33
WD repeat domain 33.
   
 0.999
SYMPK
Symplekin.
   
 0.999
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.999
ENSCAPP00000007721
annotation not available
    
 0.999
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.999
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.999
PCF11
PCF11 cleavage and polyadenylation factor subunit.
   
 0.997
CSTF3
Cleavage stimulation factor subunit 3.
  
 0.996
WDR82
WD repeat domain 82.
    
 0.994
SSU72
SSU72 homolog, RNA polymerase II CTD phosphatase.
   
 0.991
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.