STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBF1Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1619 aa)    
Predicted Functional Partners:
COPG1
Coatomer protein complex subunit gamma 1.
   
 0.973
ARL1
ADP ribosylation factor like GTPase 1.
    
 0.964
CIAO1
Cytosolic iron-sulfur assembly component 1.
      
 0.947
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
   
 
 0.924
ARFGEF2
ADP ribosylation factor guanine nucleotide exchange factor 2.
   
 
 0.920
RAB1A
RAB1A, member RAS oncogene family.
    
 0.913
RAB1B
RAB1B, member RAS oncogene family.
    
 0.913
ARF1
ADP ribosylation factor 1.
    
 0.875
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
    
 0.875
COPA
Coatomer protein complex subunit alpha.
   
 0.871
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.