STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHCHD7Coiled-coil-helix-coiled-coil-helix domain containing 7. (85 aa)    
Predicted Functional Partners:
ENSCAPP00000009147
annotation not available
    
 
 0.811
PUM2
Pumilio RNA binding family member 2.
    
 
 0.811
CHCHD2
Coiled-coil-helix-coiled-coil-helix domain containing 2.
   
 
 0.754
ENSCAPP00000017887
annotation not available
      
 0.749
FAM163B
Family with sequence similarity 163 member B.
      
 0.741
GNL2
G protein nucleolar 2.
   
  
 0.693
ENSCAPP00000005057
annotation not available
      
 0.687
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
      
 0.686
ENSCAPP00000018643
annotation not available
      
 0.663
IMPAD1
Inositol monophosphatase domain containing 1.
      
 0.654
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.