STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002220annotation not available (161 aa)    
Predicted Functional Partners:
SLU7
SLU7 homolog, splicing factor.
    
 0.997
ENSCAPP00000006491
annotation not available
   
 
 0.964
CCDC12
Coiled-coil domain containing 12.
   
  0.957
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.949
PRKRIP1
PRKR interacting protein 1.
   
 
 0.948
ENSCAPP00000014011
annotation not available
   
 0.945
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.941
CXorf56
Chromosome X open reading frame 56.
     
 0.941
MTREX
Mtr4 exosome RNA helicase.
    
  0.939
DHX38
DEAH-box helicase 38.
   
 0.935
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.