STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002225annotation not available (188 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.940
RBX1
Ring-box 1.
    
 0.894
KLHL25
Kelch like family member 25.
  
 
 
0.850
KLHL7
Kelch like family member 7.
    
 
0.842
KBTBD8
Kelch repeat and BTB domain containing 8.
 
  
  0.838
ENSCAPP00000013112
annotation not available
    
  0.830
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
    
  0.823
GAN
Gigaxonin.
  
  
 
0.812
ENSCAPP00000015494
annotation not available
  
  
 
0.812
ENSCAPP00000007661
annotation not available
    
 0.762
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.