Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM45BTransmembrane protein 45B. (276 aa)    
Predicted Functional Partners:
XRRA1
X-ray radiation resistance associated 1.
      
 0.699
SLC39A6
Solute carrier family 39 member 6.
      
 0.694
SPCS2
Signal peptidase complex subunit 2.
      
 0.589
GPR160
G protein-coupled receptor 160.
   
  
 0.589
ATE1
Arginyltransferase 1.
      
 0.585
PDCL2
Phosducin like 2.
      
 0.583
TMEM98
Transmembrane protein 98.
      
 0.575
BVES
Blood vessel epicardial substance.
      
 0.573
TMEM170B
Transmembrane protein 170B.
      
 0.570
LRMP
Lymphoid restricted membrane protein.
      
 0.564
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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