STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002232annotation not available (27 aa)    
Predicted Functional Partners:
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.983
ENSCAPP00000010045
annotation not available
  
 0.974
ENSCAPP00000006264
annotation not available
  
 0.965
ENSCAPP00000014746
annotation not available
  
 0.965
PDHB
Pyruvate dehydrogenase E1 beta subunit.
  
 0.945
CS
Citrate synthase.
  
 0.935
ENSCAPP00000004940
annotation not available
  
 
 0.918
ENSCAPP00000006987
annotation not available
  
 
 0.918
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
  
 0.913
SUCLG1
succinate-CoA ligase alpha subunit.
  
 0.910
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.