EHHADH protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EHHADH

enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase. (713 aa)

Predicted Functional Partners:

HADHB

0.998

ENSCAPP00000003426

0.994

ACOX1

0.991

ACAA2

0.989

ACOX3

0.985

ENSCAPP00000006738

0.981

ACADL

0.979

ACAT1

0.977

HMGCS2

0.977

ACADS

0.976

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACAA2	ACADL	ENSCAPP00000017169	ENSCAPP00000014164	acetyl-CoA acyltransferase 2.	acyl-CoA dehydrogenase long chain.	0.978
ACAA2	ACADS	ENSCAPP00000017169	ENSCAPP00000010809	acetyl-CoA acyltransferase 2.	acyl-CoA dehydrogenase short chain.	0.988
ACAA2	ACAT1	ENSCAPP00000017169	ENSCAPP00000015745	acetyl-CoA acyltransferase 2.	acetyl-CoA acetyltransferase 1.	0.977
ACAA2	ACOX1	ENSCAPP00000017169	ENSCAPP00000010683	acetyl-CoA acyltransferase 2.	acyl-CoA oxidase 1.	0.977
ACAA2	ACOX3	ENSCAPP00000017169	ENSCAPP00000010048	acetyl-CoA acyltransferase 2.	acyl-CoA oxidase 3, pristanoyl.	0.975
ACAA2	EHHADH	ENSCAPP00000017169	ENSCAPP00000002236	acetyl-CoA acyltransferase 2.	enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase.	0.989
ACAA2	ENSCAPP00000003426	ENSCAPP00000017169	ENSCAPP00000003426	acetyl-CoA acyltransferase 2.	annotation not available	0.936
ACAA2	ENSCAPP00000006738	ENSCAPP00000017169	ENSCAPP00000006738	acetyl-CoA acyltransferase 2.	annotation not available	0.989
ACAA2	HADHB	ENSCAPP00000017169	ENSCAPP00000015245	acetyl-CoA acyltransferase 2.	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.	0.991
ACAA2	HMGCS2	ENSCAPP00000017169	ENSCAPP00000018032	acetyl-CoA acyltransferase 2.	3-hydroxy-3-methylglutaryl-CoA synthase 2.	0.990
ACADL	ACAA2	ENSCAPP00000014164	ENSCAPP00000017169	acyl-CoA dehydrogenase long chain.	acetyl-CoA acyltransferase 2.	0.978
ACADL	ACADS	ENSCAPP00000014164	ENSCAPP00000010809	acyl-CoA dehydrogenase long chain.	acyl-CoA dehydrogenase short chain.	0.937
ACADL	ACAT1	ENSCAPP00000014164	ENSCAPP00000015745	acyl-CoA dehydrogenase long chain.	acetyl-CoA acetyltransferase 1.	0.838
ACADL	ACOX1	ENSCAPP00000014164	ENSCAPP00000010683	acyl-CoA dehydrogenase long chain.	acyl-CoA oxidase 1.	0.962
ACADL	ACOX3	ENSCAPP00000014164	ENSCAPP00000010048	acyl-CoA dehydrogenase long chain.	acyl-CoA oxidase 3, pristanoyl.	0.964
ACADL	EHHADH	ENSCAPP00000014164	ENSCAPP00000002236	acyl-CoA dehydrogenase long chain.	enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase.	0.979
ACADL	ENSCAPP00000003426	ENSCAPP00000014164	ENSCAPP00000003426	acyl-CoA dehydrogenase long chain.	annotation not available	0.990
ACADL	ENSCAPP00000006738	ENSCAPP00000014164	ENSCAPP00000006738	acyl-CoA dehydrogenase long chain.	annotation not available	0.968
ACADL	HADHB	ENSCAPP00000014164	ENSCAPP00000015245	acyl-CoA dehydrogenase long chain.	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.	0.984
ACADL	HMGCS2	ENSCAPP00000014164	ENSCAPP00000018032	acyl-CoA dehydrogenase long chain.	3-hydroxy-3-methylglutaryl-CoA synthase 2.	0.730