STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNP1Transition protein 1. (55 aa)    
Predicted Functional Partners:
DMRT1
Doublesex and mab-3 related transcription factor 1.
      
 0.939
ENSCAPP00000002709
annotation not available
   
  
 0.918
SPEM1
Spermatid maturation 1.
      
 0.918
AKAP3
A-kinase anchoring protein 3.
  
  
 0.813
ODF1
Outer dense fiber of sperm tails 1.
  
  
 0.788
ACR
Acrosin.
   
  
 0.781
MSH4
mutS homolog 4.
      
 0.748
CHD5
Chromodomain helicase DNA binding protein 5.
      
 0.692
TESMIN
Testis expressed metallothionein like protein.
      
 0.686
FAM170A
Family with sequence similarity 170 member A.
  
  
 0.665
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.