STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM168BFamily with sequence similarity 168 member B. (195 aa)    
Predicted Functional Partners:
WSB2
WD repeat and SOCS box containing 2.
      
 0.635
CASC3
CASC3 exon junction complex subunit.
   
  
 0.634
C2CD5
C2 calcium dependent domain containing 5.
      
 0.577
COPE
Coatomer protein complex subunit epsilon.
      
 0.571
NFU1
NFU1 iron-sulfur cluster scaffold.
      
 0.570
TADA2A
Transcriptional adaptor 2A.
      
 0.569
PTPN14
Protein tyrosine phosphatase non-receptor type 14.
      
 0.555
CDC27
Cell division cycle 27.
    
 
 0.539
ENSCAPP00000017524
annotation not available
      
 0.513
RGMA
Repulsive guidance molecule BMP co-receptor a.
      
 0.455
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.