Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002246annotation not available (346 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 0.998
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.983
SUV39H2
Suppressor of variegation 3-9 homolog 2.
   
 0.982
POGZ
Pogo transposable element derived with ZNF domain.
    
 0.982
NSL1
NSL1 component of MIS12 kinetochore complex.
    
 
 0.981
CBX1
Chromobox 1.
   
 
 0.971
ENSCAPP00000004536
annotation not available
    
 
 0.969
CHAF1B
Chromatin assembly factor 1 subunit B.
    
 
 0.965
NSD3
Nuclear receptor binding SET domain protein 3.
    
 0.965
CHAF1A
Chromatin assembly factor 1 subunit A.
    
 
 0.962
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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