Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UPK3AUroplakin 3A. (208 aa)    
Predicted Functional Partners:
UPK2
Uroplakin 2.
   
 
 0.989
UPK1A
Uroplakin 1A.
   
 
 0.967
SNX31
Sorting nexin 31.
    
   0.923
CD151
CD151 molecule (Raph blood group).
    
 
 0.594
ENSCAPP00000017396
annotation not available
    
 
 0.590
ENSCAPP00000003297
annotation not available
      
 0.584
CD37
CD37 molecule.
    
 
 0.580
TMEM14A
Transmembrane protein 14A.
      
 0.573
GGT5
Gamma-glutamyltransferase 5.
      
 0.571
ZFAND3
Zinc finger AN1-type containing 3.
      
 0.568
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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