Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RPP40Ribonuclease P/MRP subunit p40. (316 aa)    
Predicted Functional Partners:
ENSCAPP00000015731
annotation not available
    
 0.992
PRKRA
Protein activator of interferon induced protein kinase EIF2AK2.
    
  0.991
DGCR8
DGCR8 microprocessor complex subunit.
    
  0.991
TARBP2
TARBP2 subunit of RISC loading complex.
    
  0.991
EME1
Essential meiotic structure-specific endonuclease 1.
    
  0.991
ENSCAPP00000015428
annotation not available
     
  0.991
MUS81
MUS81 structure-specific endonuclease subunit.
     
  0.991
POP5
POP5 homolog, ribonuclease P/MRP subunit.
   
 0.988
RPP30
Ribonuclease P/MRP subunit p30.
    
 0.987
POP4
POP4 homolog, ribonuclease P/MRP subunit.
   
 0.984
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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