Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NECAB1N-terminal EF-hand calcium binding protein 1. (239 aa)    
Predicted Functional Partners:
NECAB3
N-terminal EF-hand calcium binding protein 3.
    
   0.959
NECAB2
N-terminal EF-hand calcium binding protein 2.
    
   0.958
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.787
EPB41L3
Erythrocyte membrane protein band 4.1 like 3.
    
 
 0.578
APBA2
Amyloid beta precursor protein binding family A member 2.
   
 
 0.571
WDR24
WD repeat domain 24.
     
 0.570
ENSCAPP00000010124
annotation not available
      
 0.569
APBB2
Amyloid beta precursor protein binding family B member 2.
   
 0.555
WDR90
WD repeat domain 90.
    
 0.548
ENSCAPP00000000270
annotation not available
    
 0.538
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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