STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM130Transmembrane protein 130. (326 aa)    
Predicted Functional Partners:
SMPD1
Sphingomyelin phosphodiesterase 1.
   
 
 0.791
UGCG
UDP-glucose ceramide glucosyltransferase.
     
 0.778
GALC
Galactosylceramidase.
     
 0.762
GBA2
Glucosylceramidase beta 2.
     
 0.762
ASAH1
N-acylsphingosine amidohydrolase 1.
   
 
 0.762
GUSB
Glucuronidase beta.
  
 
 0.759
ENSCAPP00000008344
annotation not available
   
 0.735
ENSCAPP00000006015
annotation not available
    
 0.724
ENSCAPP00000011103
annotation not available
    
 0.722
GLB1
Galactosidase beta 1.
  
 0.710
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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