STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT10BtRNA methyltransferase 10B. (281 aa)    
Predicted Functional Partners:
WDR4
WD repeat domain 4.
   
 0.949
TIMM22
Translocase of inner mitochondrial membrane 22.
   
 
  0.920
TRMT6
tRNA methyltransferase 6.
   
 
 0.917
ENSCAPP00000003716
annotation not available
   
 
  0.916
TRMT61A
tRNA methyltransferase 61A.
   
 0.907
METTL1
Methyltransferase like 1.
   
 0.852
SNU13
Small nuclear ribonucleoprotein 13.
   
 
 0.846
RPP30
Ribonuclease P/MRP subunit p30.
   
 
  0.840
POP1
POP1 homolog, ribonuclease P/MRP subunit.
   
 
  0.830
POP4
POP4 homolog, ribonuclease P/MRP subunit.
   
 
  0.825
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.