STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNUPNSnurportin 1. (339 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
    
 0.995
ENSCAPP00000003757
annotation not available
    
 0.986
ENSCAPP00000015628
annotation not available
    
 0.971
NUP214
Nucleoporin 214.
    
 0.941
ENSCAPP00000009156
annotation not available
     
 0.922
KPNA4
Karyopherin subunit alpha 4.
     
 0.922
KPNA3
Karyopherin subunit alpha 3.
     
 0.921
ENSCAPP00000018284
annotation not available
     
 0.920
ENSCAPP00000009578
annotation not available
    
 0.888
DDX20
DEAD-box helicase 20.
    
 0.886
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.