STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX21Sorting nexin family member 21. (291 aa)    
Predicted Functional Partners:
ENSCAPP00000013982
annotation not available
    
 
 0.693
LRRK1
Leucine rich repeat kinase 1.
    
   0.656
RPS6KC1
Ribosomal protein S6 kinase C1.
    
 0.630
SNX15
Sorting nexin 15.
    
 0.576
SNX31
Sorting nexin 31.
      
 0.568
ENSCAPP00000008427
annotation not available
      
 0.524
ENSCAPP00000000716
annotation not available
     
 0.498
PDPK1
3-phosphoinositide dependent protein kinase 1.
    
  0.494
ENSCAPP00000011016
annotation not available
     
 0.464
SNX13
Sorting nexin 13.
      
 0.454
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.