STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROX1Prospero homeobox 1. (737 aa)    
Predicted Functional Partners:
PAX6
Paired box 6.
   
 
 0.654
RANBP3
RAN binding protein 3.
      
 0.599
ENSCAPP00000015438
annotation not available
      
 0.595
XPO7
Exportin 7.
      
 0.595
IPO4
Importin 4.
      
 0.595
ENSCAPP00000013687
annotation not available
      
 0.576
ENSCAPP00000016739
annotation not available
      
 0.576
TBX6
T-box transcription factor 6.
      
 0.564
NUP210
Nucleoporin 210.
      
 0.546
NR5A2
Nuclear receptor subfamily 5 group A member 2.
    
 
 0.475
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.