Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PROX1Prospero homeobox 1. (737 aa)    
Predicted Functional Partners:
HDAC3
Histone deacetylase 3.
    
 
 0.809
NR5A2
Nuclear receptor subfamily 5 group A member 2.
    
 
 0.796
FLT4
Fms related tyrosine kinase 4.
    
 
 0.601
TBX6
T-box transcription factor 6.
      
 0.598
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
    
 0.593
ENSCAPP00000009577
annotation not available
    
   0.585
VEGFC
Vascular endothelial growth factor C.
      
 0.579
FOXN4
Forkhead box N4.
      
 0.572
ENSCAPP00000014824
annotation not available
      
 0.568
RANBP3
RAN binding protein 3.
      
 0.564
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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