STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A7Solute carrier family 1 member 7. (574 aa)    
Predicted Functional Partners:
SLC6A19
Solute carrier family 6 member 19.
  
 
 0.898
SLC6A9
Solute carrier family 6 member 9.
    
 0.889
SLC6A4
Solute carrier family 6 member 4.
    
 0.885
SLC38A2
Solute carrier family 38 member 2.
    
 
 0.873
SLC6A7
Solute carrier family 6 member 7.
    
 0.866
SLC6A1
Solute carrier family 6 member 1.
    
 0.865
ENSCAPP00000003574
annotation not available
     
  0.853
ENSCAPP00000006207
annotation not available
     
  0.853
SLC6A3
Solute carrier family 6 member 3.
    
 0.853
SLC7A5
Solute carrier family 7 member 5.
   
 
 0.848
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.