STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002278annotation not available (749 aa)    
Predicted Functional Partners:
DNAJC3
DnaJ heat shock protein family (Hsp40) member C3.
    
 0.908
ZNF574
Zinc finger protein 574.
    
   0.846
ZNF526
Zinc finger protein 526.
    
   0.846
RPL3
Ribosomal protein L3.
    
   0.801
ENSCAPP00000004766
annotation not available
    
  0.749
ENSCAPP00000004218
annotation not available
    
 
 0.724
THAP1
THAP domain containing 1.
    
 
 0.710
THAP4
THAP domain containing 4.
    
 
 0.692
CGGBP1
CGG triplet repeat binding protein 1.
    
 
 0.625
CARMIL2
Capping protein regulator and myosin 1 linker 2.
      
 0.571
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.