STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF145Ring finger protein 145. (534 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
    
 0.907
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 0.902
ENSCAPP00000017181
annotation not available
    
 0.848
ERLEC1
Endoplasmic reticulum lectin 1.
    
 0.810
OS9
OS9 endoplasmic reticulum lectin.
    
 0.810
DERL1
Derlin 1.
    
 0.807
DERL2
Derlin 2.
    
 0.804
ENSCAPP00000017700
annotation not available
    
 0.804
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.799
MARCHF6
Membrane associated ring-CH-type finger 6.
    
 0.753
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.