STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPAP1RNA polymerase II associated protein 1. (1356 aa)    
Predicted Functional Partners:
ENSCAPP00000017743
annotation not available
    
 
 0.894
GPN1
GPN-loop GTPase 1.
    
 
 0.763
POLR2C
RNA polymerase II subunit C.
    
 
 0.739
POLR1C
RNA polymerase I and III subunit C.
    
 
 0.574
GPN3
GPN-loop GTPase 3.
      
 0.567
ENSCAPP00000005654
annotation not available
      
 0.555
RPAP3
RNA polymerase II associated protein 3.
      
 0.555
ENSCAPP00000012872
annotation not available
    
 
 0.537
ENSCAPP00000010381
annotation not available
      
 0.513
POLR2B
RNA polymerase II subunit B.
    
 
 0.491
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.