ENSCAPP00000002289 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000002289

annotation not available (68 aa)

Predicted Functional Partners:

TRAF3IP1

0.999

IFT57

0.999

IFT88

0.997

IFT172

0.997

IFT27

0.996

ENSCAPP00000008760

0.995

IFT140

0.995

IFT46

0.995

ENSCAPP00000001832

0.990

ENSCAPP00000016241

0.990

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001832	ENSCAPP00000002289	ENSCAPP00000001832	ENSCAPP00000002289	annotation not available	annotation not available	0.990
ENSCAPP00000001832	ENSCAPP00000008760	ENSCAPP00000001832	ENSCAPP00000008760	annotation not available	annotation not available	0.998
ENSCAPP00000001832	ENSCAPP00000016241	ENSCAPP00000001832	ENSCAPP00000016241	annotation not available	annotation not available	0.999
ENSCAPP00000001832	IFT140	ENSCAPP00000001832	ENSCAPP00000012363	annotation not available	Intraflagellar transport 140.	0.992
ENSCAPP00000001832	IFT172	ENSCAPP00000001832	ENSCAPP00000017314	annotation not available	Intraflagellar transport 172.	0.993
ENSCAPP00000001832	IFT27	ENSCAPP00000001832	ENSCAPP00000009542	annotation not available	Intraflagellar transport 27.	0.999
ENSCAPP00000001832	IFT46	ENSCAPP00000001832	ENSCAPP00000015858	annotation not available	Intraflagellar transport 46.	0.999
ENSCAPP00000001832	IFT57	ENSCAPP00000001832	ENSCAPP00000011105	annotation not available	Intraflagellar transport 57.	0.999
ENSCAPP00000001832	IFT88	ENSCAPP00000001832	ENSCAPP00000015202	annotation not available	Intraflagellar transport 88.	0.997
ENSCAPP00000001832	TRAF3IP1	ENSCAPP00000001832	ENSCAPP00000003144	annotation not available	TRAF3 interacting protein 1.	0.979
ENSCAPP00000002289	ENSCAPP00000001832	ENSCAPP00000002289	ENSCAPP00000001832	annotation not available	annotation not available	0.990
ENSCAPP00000002289	ENSCAPP00000008760	ENSCAPP00000002289	ENSCAPP00000008760	annotation not available	annotation not available	0.995
ENSCAPP00000002289	ENSCAPP00000016241	ENSCAPP00000002289	ENSCAPP00000016241	annotation not available	annotation not available	0.990
ENSCAPP00000002289	IFT140	ENSCAPP00000002289	ENSCAPP00000012363	annotation not available	Intraflagellar transport 140.	0.995
ENSCAPP00000002289	IFT172	ENSCAPP00000002289	ENSCAPP00000017314	annotation not available	Intraflagellar transport 172.	0.997
ENSCAPP00000002289	IFT27	ENSCAPP00000002289	ENSCAPP00000009542	annotation not available	Intraflagellar transport 27.	0.996
ENSCAPP00000002289	IFT46	ENSCAPP00000002289	ENSCAPP00000015858	annotation not available	Intraflagellar transport 46.	0.995
ENSCAPP00000002289	IFT57	ENSCAPP00000002289	ENSCAPP00000011105	annotation not available	Intraflagellar transport 57.	0.999
ENSCAPP00000002289	IFT88	ENSCAPP00000002289	ENSCAPP00000015202	annotation not available	Intraflagellar transport 88.	0.997
ENSCAPP00000002289	TRAF3IP1	ENSCAPP00000002289	ENSCAPP00000003144	annotation not available	TRAF3 interacting protein 1.	0.999