Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002305annotation not available (470 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
  
 0.975
ENSCAPP00000002965
annotation not available
   
 0.878
ENSCAPP00000016219
annotation not available
     
  0.837
KIAA0513
KIAA0513.
   
 0.590
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.590
ENSCAPP00000005312
annotation not available
  
 
 
 0.551
SLC7A14
Solute carrier family 7 member 14.
  
 
 
 0.531
SLC22A2
Solute carrier family 22 member 2.
   
 
 0.509
QRSL1
glutaminyl-tRNA amidotransferase subunit QRSL1.
   
 0.506
FAAH
Fatty acid amide hydrolase.
   
 0.506
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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