Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNRPCSmall nuclear ribonucleoprotein polypeptide C. (142 aa)    
Predicted Functional Partners:
ENSCAPP00000001161
annotation not available
   
 0.999
SNRPA
Small nuclear ribonucleoprotein polypeptide A.
   
 0.999
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.999
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.999
ENSCAPP00000017572
annotation not available
   
 0.999
ENSCAPP00000001654
annotation not available
   
 0.998
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
   
 0.998
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
   
 0.996
PRPF39
pre-mRNA processing factor 39.
   
 0.995
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 0.995
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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