STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP54Cilia and flagella associated protein 54. (2870 aa)    
Predicted Functional Partners:
TMEM212
Transmembrane protein 212.
   
  
 0.928
ENSCAPP00000012201
annotation not available
   
    0.668
ENSCAPP00000010310
annotation not available
   
 
 0.666
ENSCAPP00000000616
annotation not available
    
 
 0.586
CFAP74
Cilia and flagella associated protein 74.
    
 
 0.543
ENSCAPP00000008352
annotation not available
    
 
 0.537
POLR3C
RNA polymerase III subunit C.
    
   0.521
ENSCAPP00000004253
annotation not available
    
 
 0.513
ERCC6L2
ERCC excision repair 6 like 2.
    
 
 0.477
HLTF
Helicase like transcription factor.
    
 
 0.477
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.