STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNK4Potassium two pore domain channel subfamily K member 4. (382 aa)    
Predicted Functional Partners:
KCNK10
Potassium two pore domain channel subfamily K member 10.
     
 0.921
SGSM2
Small G protein signaling modulator 2.
      
 0.768
KCNJ13
Potassium inwardly rectifying channel subfamily J member 13.
     
 0.749
KCNH3
Potassium voltage-gated channel subfamily H member 3.
   
 0.742
KCNQ3
Potassium voltage-gated channel subfamily Q member 3.
     
 0.740
KCNE3
Potassium voltage-gated channel subfamily E regulatory subunit 3.
     
 0.718
POPDC3
Popeye domain containing 3.
     
  0.699
POPDC2
Popeye domain containing 2.
     
  0.699
GPR137
G protein-coupled receptor 137.
      
 0.689
KCNN1
Potassium calcium-activated channel subfamily N member 1.
     
 0.672
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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