STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRMT44tRNA methyltransferase 44 homolog. (545 aa)    
Predicted Functional Partners:
PUS1
Pseudouridine synthase 1.
   
  
 0.654
METTL1
Methyltransferase like 1.
   
  
 0.651
EEF1AKMT2
EEF1A lysine methyltransferase 2.
   
  
 0.638
METTL21A
Methyltransferase like 21A.
   
  
 0.622
FTSJ1
FtsJ RNA 2'-O-methyltransferase 1.
   
  
 0.620
TRMT13
tRNA methyltransferase 13 homolog.
   
  
 0.612
WDR6
WD repeat domain 6.
   
  
 0.606
WDR4
WD repeat domain 4.
   
  
 0.588
EEF1AKNMT
eEF1A lysine and N-terminal methyltransferase.
   
  
 0.580
TRMT6
tRNA methyltransferase 6.
   
  
 0.548
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.