STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHKBP1SH3KBP1 binding protein 1. (608 aa)    
Predicted Functional Partners:
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.666
KCTD3
Potassium channel tetramerization domain containing 3.
  
 
  
0.586
ENSCAPP00000014378
annotation not available
      
 0.524
ENSCAPP00000005376
annotation not available
    
 
 0.510
KCTD11
Potassium channel tetramerization domain containing 11.
    
 
 0.503
LRRC40
Leucine rich repeat containing 40.
    
   0.491
SNX27
Sorting nexin 27.
    
   0.474
KCTD7
Potassium channel tetramerization domain containing 7.
    
 
 0.463
KCTD21
Potassium channel tetramerization domain containing 21.
    
 
 0.432
CUL3
Cullin 3.
    
 0.430
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.