STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000002338annotation not available (115 aa)    
Predicted Functional Partners:
NIT1
Nitrilase 1.
   
 0.824
ENPP4
Ectonucleotide pyrophosphatase/phosphodiesterase 4.
    
 0.808
ENPP5
Ectonucleotide pyrophosphatase/phosphodiesterase family member 5.
    
 0.697
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
  0.678
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
  0.678
TBP
TATA-box binding protein.
   
 0.652
ENSCAPP00000015721
annotation not available
   
 0.652
TBPL1
TATA-box binding protein like 1.
   
 0.652
FDXR
Ferredoxin reductase.
   
 
 0.623
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A.
    
 0.619
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.