PRND protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

PRND

Prion like protein doppel. (176 aa)

Predicted Functional Partners:

PRNP

0.804

MAPK15

0.781

MTG1

0.572

ENSCAPP00000010765

0.568

TRIB3

0.567

ENSCAPP00000003804

0.538

ENSCAPP00000000723

0.520

ENSCAPP00000010741

0.457

PIGK

0.454

PDYN

0.446

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000723	PRND	ENSCAPP00000000723	ENSCAPP00000002341	annotation not available	Prion like protein doppel.	0.520
ENSCAPP00000003804	MAPK15	ENSCAPP00000003804	ENSCAPP00000004324	annotation not available	Mitogen-activated protein kinase 15.	0.551
ENSCAPP00000003804	PRND	ENSCAPP00000003804	ENSCAPP00000002341	annotation not available	Prion like protein doppel.	0.538
ENSCAPP00000010741	PDYN	ENSCAPP00000010741	ENSCAPP00000007335	annotation not available	Prodynorphin.	0.614
ENSCAPP00000010741	PRND	ENSCAPP00000010741	ENSCAPP00000002341	annotation not available	Prion like protein doppel.	0.457
ENSCAPP00000010765	PRND	ENSCAPP00000010765	ENSCAPP00000002341	annotation not available	Prion like protein doppel.	0.568
MAPK15	ENSCAPP00000003804	ENSCAPP00000004324	ENSCAPP00000003804	Mitogen-activated protein kinase 15.	annotation not available	0.551
MAPK15	PRND	ENSCAPP00000004324	ENSCAPP00000002341	Mitogen-activated protein kinase 15.	Prion like protein doppel.	0.781
MTG1	PRND	ENSCAPP00000000366	ENSCAPP00000002341	Mitochondrial ribosome associated GTPase 1.	Prion like protein doppel.	0.572
PDYN	ENSCAPP00000010741	ENSCAPP00000007335	ENSCAPP00000010741	Prodynorphin.	annotation not available	0.614
PDYN	PRND	ENSCAPP00000007335	ENSCAPP00000002341	Prodynorphin.	Prion like protein doppel.	0.446
PIGK	PRND	ENSCAPP00000018362	ENSCAPP00000002341	Phosphatidylinositol glycan anchor biosynthesis class K.	Prion like protein doppel.	0.454
PRND	ENSCAPP00000000723	ENSCAPP00000002341	ENSCAPP00000000723	Prion like protein doppel.	annotation not available	0.520
PRND	ENSCAPP00000003804	ENSCAPP00000002341	ENSCAPP00000003804	Prion like protein doppel.	annotation not available	0.538
PRND	ENSCAPP00000010741	ENSCAPP00000002341	ENSCAPP00000010741	Prion like protein doppel.	annotation not available	0.457
PRND	ENSCAPP00000010765	ENSCAPP00000002341	ENSCAPP00000010765	Prion like protein doppel.	annotation not available	0.568
PRND	MAPK15	ENSCAPP00000002341	ENSCAPP00000004324	Prion like protein doppel.	Mitogen-activated protein kinase 15.	0.781
PRND	MTG1	ENSCAPP00000002341	ENSCAPP00000000366	Prion like protein doppel.	Mitochondrial ribosome associated GTPase 1.	0.572
PRND	PDYN	ENSCAPP00000002341	ENSCAPP00000007335	Prion like protein doppel.	Prodynorphin.	0.446
PRND	PIGK	ENSCAPP00000002341	ENSCAPP00000018362	Prion like protein doppel.	Phosphatidylinositol glycan anchor biosynthesis class K.	0.454