RBM25 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene co-occurrence

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[Homology]

Score

RBM25

RNA binding motif protein 25. (709 aa)

Predicted Functional Partners:

PRPF40A

0.999

ENSCAPP00000011676

0.999

SRRM1

0.998

ENSCAPP00000005085

0.997

ENSCAPP00000009270

0.991

ENSCAPP00000016480

0.990

SF3B1

0.989

SRSF11

0.988

ENSCAPP00000017572

0.987

SNRPA1

0.985

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000005085	ENSCAPP00000009270	ENSCAPP00000005085	ENSCAPP00000009270	annotation not available	annotation not available	0.816
ENSCAPP00000005085	ENSCAPP00000011676	ENSCAPP00000005085	ENSCAPP00000011676	annotation not available	annotation not available	0.978
ENSCAPP00000005085	ENSCAPP00000016480	ENSCAPP00000005085	ENSCAPP00000016480	annotation not available	annotation not available	0.808
ENSCAPP00000005085	ENSCAPP00000017572	ENSCAPP00000005085	ENSCAPP00000017572	annotation not available	annotation not available	0.994
ENSCAPP00000005085	PRPF40A	ENSCAPP00000005085	ENSCAPP00000003679	annotation not available	pre-mRNA processing factor 40 homolog A.	0.959
ENSCAPP00000005085	RBM25	ENSCAPP00000005085	ENSCAPP00000002345	annotation not available	RNA binding motif protein 25.	0.997
ENSCAPP00000005085	SF3B1	ENSCAPP00000005085	ENSCAPP00000003928	annotation not available	Splicing factor 3b subunit 1.	0.977
ENSCAPP00000005085	SNRPA1	ENSCAPP00000005085	ENSCAPP00000005983	annotation not available	Small nuclear ribonucleoprotein polypeptide A.	0.736
ENSCAPP00000005085	SRRM1	ENSCAPP00000005085	ENSCAPP00000010196	annotation not available	Serine and arginine repetitive matrix 1.	0.711
ENSCAPP00000005085	SRSF11	ENSCAPP00000005085	ENSCAPP00000017995	annotation not available	Serine and arginine rich splicing factor 11.	0.928
ENSCAPP00000009270	ENSCAPP00000005085	ENSCAPP00000009270	ENSCAPP00000005085	annotation not available	annotation not available	0.816
ENSCAPP00000009270	ENSCAPP00000011676	ENSCAPP00000009270	ENSCAPP00000011676	annotation not available	annotation not available	0.535
ENSCAPP00000009270	ENSCAPP00000016480	ENSCAPP00000009270	ENSCAPP00000016480	annotation not available	annotation not available	0.540
ENSCAPP00000009270	ENSCAPP00000017572	ENSCAPP00000009270	ENSCAPP00000017572	annotation not available	annotation not available	0.922
ENSCAPP00000009270	PRPF40A	ENSCAPP00000009270	ENSCAPP00000003679	annotation not available	pre-mRNA processing factor 40 homolog A.	0.972
ENSCAPP00000009270	RBM25	ENSCAPP00000009270	ENSCAPP00000002345	annotation not available	RNA binding motif protein 25.	0.991
ENSCAPP00000009270	SF3B1	ENSCAPP00000009270	ENSCAPP00000003928	annotation not available	Splicing factor 3b subunit 1.	0.995
ENSCAPP00000009270	SNRPA1	ENSCAPP00000009270	ENSCAPP00000005983	annotation not available	Small nuclear ribonucleoprotein polypeptide A.	0.990
ENSCAPP00000009270	SRRM1	ENSCAPP00000009270	ENSCAPP00000010196	annotation not available	Serine and arginine repetitive matrix 1.	0.743
ENSCAPP00000009270	SRSF11	ENSCAPP00000009270	ENSCAPP00000017995	annotation not available	Serine and arginine rich splicing factor 11.	0.706