STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX18T-box transcription factor 18. (436 aa)    
Predicted Functional Partners:
MXD1
MAX dimerization protein 1.
     
 0.929
CTNNB1
Catenin beta 1.
     
 0.916
ETV3
ETS variant transcription factor 3.
     
 0.913
BIN1
Bridging integrator 1.
     
  0.913
DR1
Down-regulator of transcription 1.
     
 0.913
LIN54
Lin-54 DREAM MuvB core complex component.
     
  0.913
ENSCAPP00000010800
annotation not available
     
  0.913
ENSCAPP00000011269
annotation not available
     
  0.913
DDX20
DEAD-box helicase 20.
     
  0.913
MAX
MYC associated factor X.
     
  0.912
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.