Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDZD3PDZ domain containing 3. (495 aa)    
Predicted Functional Partners:
SLC34A1
Solute carrier family 34 member 1.
   
 0.918
GUCY2C
Guanylate cyclase 2C.
    
 
 0.733
ENSCAPP00000018529
annotation not available
    
 
 0.708
ENSCAPP00000008920
annotation not available
    
 0.644
CFTR
CF transmembrane conductance regulator.
    
 0.636
RASL10B
RAS like family 10 member B.
    
 0.623
GUCA2B
Guanylate cyclase activator 2B.
   
  
 0.610
SLC34A2
Solute carrier family 34 member 2.
   
 0.607
SLC34A3
Solute carrier family 34 member 3.
   
 0.607
GUCA2A
Guanylate cyclase activator 2A.
   
  
 0.602
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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