STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA2ATP binding cassette subfamily A member 2. (2427 aa)    
Predicted Functional Partners:
NR1H2
Nuclear receptor subfamily 1 group H member 2.
    
 0.740
NR1H3
Nuclear receptor subfamily 1 group H member 3.
    
 0.740
ABCA3
ATP binding cassette subfamily A member 3.
    
0.735
ABCC1
ATP binding cassette subfamily C member 1.
   
0.703
APOA1
Apolipoprotein A1.
     
 0.699
ABCD4
ATP binding cassette subfamily D member 4.
     
 0.693
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
     
0.693
ABCG5
ATP binding cassette subfamily G member 5.
     
0.661
ABCG8
ATP binding cassette subfamily G member 8.
     
0.661
ENSCAPP00000003131
annotation not available
    
 0.609
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.