Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCA2ATP binding cassette subfamily A member 2. (2427 aa)    
Predicted Functional Partners:
NR1H2
Nuclear receptor subfamily 1 group H member 2.
    
 0.875
NR1H3
Nuclear receptor subfamily 1 group H member 3.
    
 0.875
APOA1
Apolipoprotein A1.
     
 0.856
TRIP12
Thyroid hormone receptor interactor 12.
     
 0.845
ABCA3
ATP binding cassette subfamily A member 3.
    
 0.835
ABCD4
ATP binding cassette subfamily D member 4.
     
 0.808
ABCB8
ATP binding cassette subfamily B member 8.
   
 0.776
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
    
 0.775
ABCG5
ATP binding cassette subfamily G member 5.
     
 0.763
RAC1
Rac family small GTPase 1.
    
 0.761
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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